Source code for xcube.core.zarrstore.holder

# The MIT License (MIT)
# Copyright (c) 2022 by the xcube development team and contributors
# 
# Permission is hereby granted, free of charge, to any person obtaining a
# copy of this software and associated documentation files (the "Software"),
# to deal in the Software without restriction, including without limitation
# the rights to use, copy, modify, merge, publish, distribute, sublicense,
# and/or sell copies of the Software, and to permit persons to whom the
# Software is furnished to do so, subject to the following conditions:
# 
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
# 
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
# DEALINGS IN THE SOFTWARE.

import collections.abc
import threading
import warnings
from typing import Optional

import xarray as xr

from xcube.constants import LOG
from xcube.util.assertions import assert_instance


[docs] @xr.register_dataset_accessor('zarr_store') class ZarrStoreHolder: """Represents a xarray dataset property ``zarr_store``. It is used to permanently associate a dataset with its Zarr store, which would otherwise not be possible. In xcube server, we use the new property to expose datasets via the S3 emulation API. For that concept to work, datasets must be associated with their Zarr stores explicitly. Therefore, the xcube data store framework sets the Zarr stores of datasets after opening them ``xr.open_zarr()``: ```python dataset = xr.open_zarr(zarr_store, **open_params) dataset.zarr_store.set(zarr_store) ``` Note, that the dataset may change after the Zarr store has been set, so that the dataset and its Zarr store are no longer in sync. This may be an issue and limit the application of the new property. :param dataset: The xarray dataset that is associated with a Zarr store. """ def __init__(self, dataset: xr.Dataset): self._dataset = dataset self._zarr_store: Optional[collections.abc.MutableMapping] = None self._lock = threading.RLock()
[docs] def get(self) -> collections.abc.MutableMapping: """Get the Zarr store of a dataset. If no Zarr store has been set, the method will use ``GenericZarrStore.from_dataset()`` to create and set one. :return: The Zarr store. """ if self._zarr_store is None: # Double-checked locking pattern with self._lock: if self._zarr_store is None: from xcube.core.zarrstore import GenericZarrStore self._zarr_store = GenericZarrStore.from_dataset( self._dataset ) source = self._dataset.encoding.get("source", "?") LOG.warning(f"dataset {source!r} is assigned a" f" GenericZarrStore which may introduce" f" performance penalties") return self._zarr_store
[docs] def set(self, zarr_store: collections.abc.MutableMapping) -> None: """Set the Zarr store of a dataset. :param zarr_store: The Zarr store. """ assert_instance(zarr_store, collections.abc.MutableMapping, name='zarr_store') with self._lock: self._zarr_store = zarr_store
[docs] def reset(self) -> None: """Resets the Zarr store.""" with self._lock: self._zarr_store = None